Bioinformatics

The bioinformatics program can be taken as part of any of the M.Sc. programs in biology: Evolutionary and Environmental Biology, 

Required courses

One introductory course is compulsory for all students:

Semester A

Course Name

Lecturer

Credits

Course No.

Research Methodologies in BioinformaticsEyal Privman, Martin Mikl4 points221.4425
Python programing*David Deutsch3 points221.4425

* A programming course is compulsory for students who didn’t learn programming in their previous studies. Students that studied a programming course can ask for an exemption.

Mandatory-elective courses

A total of 12 points is required, including the mandatory courses above and courses from the following list.

Course name

Lecturer

Pts

Course No.

Semester A

   

Algorithms in computational genomics

Sagi Snir

3

221.4424

Biological Regulation in Development: from Genes to Embryos (once every two years)Smadar Ben Tabou De Leon2227.4018
Structural bioinformatics

Mickey Kosloff

3

 
R languageEran Tauber3221.5408
Genomic mapping
Eyal Privman2

221.4406

Marine microbiology
Daniel Sher2

227.4006

Research seminar in quantitative biology and modelingDaniel Sher 
Between the semesters: Advanced workshop in bioinformaticsDaniel Sher, Eyal Privman

3

 

Semester B

   

Statistical methods in genomics

Sagi Snir

3

221.4420

Foundations of molecular evolutionEyal Privman2

221.4412

Biological clocksEran Tauber221.4023
Microbial evolutionSarit Avrani2221.4022
Applications of machine learning in biologyDavid Deutsch3 222.4036
Applications of machine learning in healthcareOrtal Dayan3286.4112
In the summer: Data science summer schoolDavid Deutsch

3

Winter workshops in bioinformatics

Every year we are holding a one-week advanced workshop in bioinformatics during the semester break:

8-12/2/2015: Workshop on Environmental Genomics and the Human Microbiome

21-25/2/2016: Transcriptomics! workshop

5-9/2/2017: Workshop on omics of non-model organisms

18-22/2/2018: Workshop on statistics and data visualization for omics

17-21/2/2019: Workshop on omics of omics of environmental and host-associated microbiomes

9-13/2/2020: Transcriptomics! workshop

2/2020: Transcriptomics! workshop

14-18/2/2021: Workshop on multi-omics and machine learning

29/1-2/2/2023: From genome to metabolism

17-21/3/2024: Workshop on population genomics

* For info please contact Eyal Privman or Daniel Sher.